Installation

CIMA has only been tested in Ubuntu Linux distributions. MacOS support is not guaranteed.

Install CIMA from the public gitlab

To install and work with CIMA, the best is to create a new conda environment and install CIMA there.

To install conda, please follow the instruction in the official documentation:

You can install CIMA from the public gitlab repository. To do that, follow the instructions below:

conda create -n CIMA -c bioconda -c conda-forge python=3.12
conda activate CIMA
pip install git+https://gitlab.iit.it/ina-public/cima.git